PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D02G0148
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 386aa    MW: 41917.7 Da    PI: 6.4429
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D02G0148genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.3e-10207265563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l+ l+    +l++e+
  Gh_D02G0148 207 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLSLLQRDTGTLTAEN 265
                  9***********************************************99888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-16203267IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.967205268IPR004827Basic-leucine zipper domain
PfamPF001704.5E-9207264IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-11207261No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-11207261No hitNo description
CDDcd147031.13E-25208257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MEKDKSPGLP PPSGRYTGFA AVGNVLNSTG CFGQSSDANR FSQDISKMPD NPPKNLGHRR  60
AHSEILTLPD DISFDSDLGV VGAADGPSYS DDTGEDMFSM FIDMDKFNSS SATSTFQVGE  120
SSAPAAAPAT AHMAAAAWTG MNGENQSVTV GSSEKPRVRH QHSQSMDGST SIKPEMLMSG  180
AEEVSPAEAK KALSATKLAE LAIIDPKRAK RIWANRQSAA RSKERKMRYI AELERKVQTL  240
QTEATSLSAQ LSLLQRDTGT LTAENNELKL RLTTMEQQVH LQDALNEALK DEIQHLKVLT  300
GQSIPNGGPM MNYASYGTNQ QYYPNNQAMH TLLTAQQFQQ LQIQSQKQPH PFQLQHQTGD  360
MGVRGPVPTP NHKDASSDVS LTATKD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.145731e-163boll| stem
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5897647e-66JX589764.1 Gossypium hirsutum clone NBRI_GE24526 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012481534.10.0PREDICTED: probable transcription factor PosF21
SwissprotQ040881e-154POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A0D2RE180.0A0A0D2RE18_G
STRINGVIT_05s0102g01120.t011e-172(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM24452772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-150bZIP family protein